Feature availability

This page summarizes which RAFT user-facing features are currently available and where they live. It is intended to prevent stale docs from implying that a planned or external feature is already part of the installed CLI.

RAFT feature availability

Feature	Entry point	Status	Notes
Project setup	raft setup	Implemented	Creates the RAFT workspace config and standard directories.
Off-the-shelf workflow launch	raft run / raft run-ots	Implemented	raft run creates a missing project when workflow/version arguments are supplied; otherwise it runs an existing project.
Manifest generator	Web UI	Implemented	Opens during workflow setup when no manifest is supplied; also available as a hosted browser tool.
Manifest template	raft manifest-template	Implemented	CLI fallback that writes a tab-delimited starter manifest.
Manifest validation	raft check-manifest	Implemented	Reports required-column, delimiter, sample-prefix, grouping, and optional allele issues.
Project status	raft project-status	Implemented	Read-only project summary. Workflow-specific checks can be configured with *.status.json files.
Report viewer	raft generate-reports	Implemented	Creates or serves portable report bundles for workflow outputs.
Workflow config generator	Web UI	Implemented	Used to choose workflow parameters before creating a project.
Module discovery	raft available-modules, raft available-tools, raft available-subworkflows	Implemented	Lists configured module repositories and subgroups.
Workflow discovery	raft available-workflows	Implemented	Can inspect workflow details; expensive alternate-tool scans are opt-in.
Manual workflow assembly	raft load-module, raft list-steps, raft add-step	Implemented	Advanced/developer workflow. list-steps supports TSV and JSON output.
Project packaging	raft package-project / raft load-project	Implemented	Creates and loads portable project archives.
Control panel	none in this repository	Not implemented here	Older references likely describe functionality from another branch or repository. Current docs should not instruct users to run the control-panel command.

Status terms

Implemented

Present in the current CLI or browser UI documented in this repository.

Not implemented here

Not available from this repository’s installed CLI. It may be planned, experimental, or present in another repository, but users should not expect it to work from this codebase.